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<TITLE>BLAST Search Results </TITLE>
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<BR><BR><PRE>
<b>BLASTN 2.0.10 [Aug-26-1999]</b>


<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;ffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|1348916|gb|G26684.1|G26684 human STS STS_D11570.
         (285 letters)

<b>Database:</b> Non-redundant Database of GenBank STS Division
           89,405 sequences; 32,867,852 total letters

<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
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<H3><a href="/BLAST/newoptions.html#graphical-overview"> Distribution of 4 Blast Hits on the Query Sequence</a></H3>
<input name=defline size=80 value="Mouse-over to show defline and scores. Click to show alignments">
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<map name=img_map>
<area shape=rect coords=69,101,523,106 href="#1348916" ONMOUSEOVER='document.BLASTFORM.defline.value="G26684  human STS STS_D11570.  gi|1375195|gb|G26945|G26945 huma..S= 517 E=1e-146"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=403,108,432,113 href="#6120827" ONMOUSEOVER='document.BLASTFORM.defline.value="G55508  SHGC-100856 Human Homo sapiens STS genomic, sequence tagge..S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=421,115,445,120 href="#4516686" ONMOUSEOVER='document.BLASTFORM.defline.value="AU026763  Rattus norvegicus, OTSUKA clone, OT33.16/752f07, microsa..S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=483,108,507,113 href="#720683" ONMOUSEOVER='document.BLASTFORM.defline.value="G03725  human STS WI-344...S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
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<IMG WIDTH=529 HEIGHT=122 USEMAP=#img_map BORDER=1 SRC="nph-getgif.cgi?iblast0&207891705325813.gif" ISMAP></CENTER>
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<PRE>
<PRE>

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01348916&dopt=GenBank">gb|G26684|G26684</a>  human STS STS_D11570. >gi|1375195|gb|G2694...   <a href = #1348916>517</a>  e-146
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04516686&dopt=GenBank">dbj|AU026763.1|AU026763</a>  Rattus norvegicus, OTSUKA clone, OT...   <a href = #4516686> 32</a>  1.7
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06120827&dopt=GenBank">gb|G55508.1|G55508</a>  SHGC-100856 Human Homo sapiens STS genom...   <a href = #6120827> 32</a>  1.7
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00720683&dopt=GenBank">gb|G03725|G03725</a>  human STS WI-344.                               <a href = #720683> 32</a>  1.7

<PRE>
<a name = 1348916> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01348916&dopt=GenBank">gb|G26684|G26684</a> human STS STS_D11570. >gi|1375195|gb|G26945|G26945 human STS
           SHGC-32699.
           Length = 285
           
 Score =  517 bits (261), Expect = e-146
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatccctacccttnccgttggtctctntcgctgactcgaggcacctaacatccattcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gatccctacccttnccgttggtctctntcgctgactcgaggcacctaacatccattcaca 60

                                                                       
Query: 61  cccaacacaggccagcgacttctggggctcagccacagacatggtttgtnactnttgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cccaacacaggccagcgacttctggggctcagccacagacatggtttgtnactnttgagc 120

                                                                       
Query: 121 ttctgttcctagagaatcctagaggcttgattggcccaggctgctgtntgtnctggaggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgttcctagagaatcctagaggcttgattggcccaggctgctgtntgtnctggaggc 180

                                                                       
Query: 181 aaagaatccctacctcctaggggtgaaaggaaatnaaaatggaaagttcttgtagcgcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagaatccctacctcctaggggtgaaaggaaatnaaaatggaaagttcttgtagcgcaa 240

                                                        
Query: 241 ggcctgacatgggtagctgctcaataaatgctagtntgttatttc 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcctgacatgggtagctgctcaataaatgctagtntgttatttc 285
</PRE>


<PRE>
<a name = 4516686> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04516686&dopt=GenBank">dbj|AU026763.1|AU026763</a> Rattus norvegicus, OTSUKA clone, OT33.16/752f07, microsatellite
           sequence, sequence tagged site
           Length = 307
           
 Score = 32.2 bits (16), Expect = 1.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 221 ggaaagttcttgtagc 236
           ||||||||||||||||
Sbjct: 32  ggaaagttcttgtagc 47
</PRE>


<PRE>
<a name = 6120827> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06120827&dopt=GenBank">gb|G55508.1|G55508</a> SHGC-100856 Human Homo sapiens STS genomic, sequence tagged site
           Length = 711
           
 Score = 32.2 bits (16), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 210 gaaatnaaaatggaaagtt 228
           ||||| |||||||||||||
Sbjct: 588 gaaataaaaatggaaagtt 606
</PRE>


<PRE>
<a name = 720683> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00720683&dopt=GenBank">gb|G03725|G03725</a> human STS WI-344.
           Length = 246
           
 Score = 32.2 bits (16), Expect = 1.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 260 ctcaataaatgctagt 275
           ||||||||||||||||
Sbjct: 178 ctcaataaatgctagt 163
</PRE>



<PRE>
  Database: Non-redundant Database of GenBank STS Division
    Posted date:  Dec 18, 1999  7:45 PM
  Number of letters in database: 32,867,852
  Number of sequences in database:  89,405
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3932
Number of Sequences: 89405
Number of extensions: 3932
Number of successful extensions: 1177
Number of sequences better than 10.0: 4
length of query: 285
length of database: 32,867,852
effective HSP length: 17
effective length of query: 268
effective length of database: 31,347,967
effective search space: 8401255156
effective search space used: 8401255156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

</PRE>

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